Mornings in Mendocino begin with salt in the air, flour on my sleeves, and Clementine, the starter, gurgling quietly on the counter. I love sourdough. But let me be real with you: Can sourdough bread make you sick? Yes, it absolutely can, and I learned that the hard way.
My first loaf looked good from the outside, but inside, it was doughy, underbaked, and barely fermented. I was too excited to wait. I sliced it warm, slathered it with butter, and ate nearly half the loaf. Within hours, I felt awful, nausea, bloating, and brain fog. That day, I learned something every baker eventually wonders: Can sourdough bread make you sick if it’s not made properly?
Yes. And it’s more common than people realize.
Sourdough is often praised as being easier to digest, and it usually is. But if you’re not fermenting it long enough, or if you bake it before it reaches the right internal temperature, the risks grow. Wild yeast and bacteria are powerful. When sourdough is rushed or stored improperly, it can trigger everything from stomach pain to real foodborne illness.
In my sourdough workshops, I hear stories from folks who feel unwell after eating their own loaves. They blame gluten or assume they’re sensitive to wheat. But often, it’s technique, not intolerance. Understanding how and why sourdough can make you feel sick is the first step to avoiding it.
This article answers the question, can sourdough bread make you sick, with clear insights and solutions. We’ll look at spoilage, fermentation, food safety, and how to avoid baking mistakes that hurt more than your ego.
If you’re unsure whether your bread’s making you feel off, or want to learn how long sourdough can ferment safely, or how to fix underbaked loaves, you’re in the right place.


Can Sourdough Bread Make You Sick? 7 Crucial Facts for Safe Baking
- Total Time: 12 hours 45 minutes
- Yield: 1 large loaf
- Diet: Vegetarian
Description
Learn how to bake sourdough bread safely with this process-based guide. Avoid underfermented loaves, digestive issues, and contamination by mastering time, temperature, and technique.
Ingredients
Sourdough starter (ripe and active)
Flour of choice (white, whole wheat, spelt)
Filtered water
Salt
Digital thermometer
Clean proofing baskets and cloths
Sanitized baking tools
Instructions
1. Feed your starter and ensure it’s bubbly and active before use.
2. Mix dough and allow bulk fermentation for 6–8 hours at room temp, or cold ferment overnight.
3. Pre-shape and shape dough, then proof until it passes the poke test.
4. Preheat oven and bake bread until it reaches an internal temp of 205°F (96°C).
5. Cool completely before slicing to avoid gummy texture.
6. Store cooled loaves in breathable bags or paper, not plastic.
7. Clean all equipment thoroughly to prevent contamination.
Notes
Underbaked sourdough can lead to digestive discomfort.
Short fermentation may cause bloating due to phytic acid.
Histamine-sensitive individuals should limit fermented foods.
Use a food journal to track symptoms and variables.
Always check loaves for mold, off smells, or sticky interiors.
- Prep Time: 12 hours
- Cook Time: 45 minutes
- Category: Sourdough Safety
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 slice (1/12 loaf)
- Calories: 185
- Sugar: 0.5g
- Sodium: 360mg
- Fat: 1g
- Saturated Fat: 0.2g
- Unsaturated Fat: 0.8g
- Trans Fat: 0g
- Carbohydrates: 38g
- Fiber: 2g
- Protein: 6g
- Cholesterol: 0mg
Keywords: can sourdough bread make you sick, sourdough safety, underbaked bread
Common Causes of Sourdough-Related Illness
Underfermented or Underbaked: When the Loaf Isn’t Ready
Here’s one of the most common reasons people ask: can sourdough bread make you sick? When it’s underfermented or underbaked, the answer is yes. Unfermented dough contains high levels of phytic acid, which can irritate your gut. This leads to symptoms like bloating, gas, or nausea, especially if your digestive system is sensitive.
Underbaking is another culprit. If your sourdough doesn’t reach an internal temperature of 205°F (96°C), you may be consuming bread that still contains active bacteria and unconverted starches. That can leave your stomach feeling heavy or upset. And let’s be honest, eating gummy bread never ends well.
It’s a mistake I made early on, and a common one I see in workshops. That’s why long fermentation and accurate baking are so critical to gut health. If you want to avoid discomfort, follow this fermentation guide to master the timeline and temperature needed for safe bread.
Mold, Spoilage & Contamination: The Invisible Dangers
Still wondering can sourdough bread make you sick? Another answer is spoilage. While sourdough has natural preservation qualities, it isn’t immune to mold or bacteria. If stored improperly, like wrapped too tightly while warm or left in a humid kitchen, it can develop mycotoxins. These toxins from mold can absolutely make you sick.
Contamination is another risk. Unwashed bannetons, old cloths, or dirty containers can introduce harmful microbes. Even your refrigerator can be a problem if your dough is stored near raw meat. Always inspect your bread before eating. If it smells odd, tastes unusually bitter, or feels sticky, toss it.
Proper handling and storage are key to safety. For smart tips, check how to store bread safely to keep your loaves fresh and healthy.
So, can sourdough bread make you sick? Yes, when fermentation, baking, or hygiene are ignored. But with awareness, you can avoid these mistakes and enjoy bread that’s both delicious and safe.

Who Should Be Cautious with Sourdough?
Gluten Sensitivity vs. Celiac Disease
A common question I hear is: can sourdough bread make you sick if you’re sensitive to gluten? The answer depends entirely on your condition. Sourdough fermentation does reduce gluten levels, thanks to wild yeasts and lactobacilli breaking it down. That’s great news for people with non-celiac gluten sensitivity, they often tolerate sourdough better than standard bread.
But let’s be clear: sourdough is not gluten-free. If you have celiac disease, even a crumb of sourdough can trigger a dangerous autoimmune reaction. In this case, yes, sourdough can absolutely make you sick. Not because it’s bad bread, but because it still contains enough gluten to cause damage.
If you’re unsure whether your symptoms are from gluten or gut imbalance, consult a specialist and keep a food log. You can also experiment with low-gluten baking to see how different grains and fermentation lengths affect you.
Histamines and Gut Imbalances
Here’s a surprise many don’t expect: histamines. These naturally occurring compounds are found in most fermented foods, including sourdough. If your body struggles to break them down, the result can be headaches, rashes, brain fog, or bloating after even one slice.
That’s another case where can sourdough bread make you sick has a yes attached, just not for the reasons most people think. It’s not about bad bread. It’s about how your body reacts to fermented compounds.
People with IBS or leaky gut also report mixed reactions. Sourdough may help heal the gut over time, but if your gut lining is inflamed or bacterial balance is off, it might be too much too soon.
If you’re sensitive to fermented foods or want to explore supportive options, check out our collection on fermentation and digestion. It’s packed with tools to help you understand what your belly is trying to tell you.
So yes, can sourdough bread make you sick? If you have celiac, histamine intolerance, or unresolved gut issues, it can. But with knowledge and small changes, you may still find your slice of joy.
How to Eat Sourdough Safely & Confidently
Smart Fermentation: Time, Temp, and Tools
Bakers often wonder: can sourdough bread make you sick if it looks fine? The truth is, appearance isn’t everything. If fermentation or baking falls short, your bread may still cause digestive upset, even if it smells amazing.
Start with fermentation. Sourdough isn’t just a recipe; it’s a biological process. Your dough needs at least 6–8 hours at room temperature, or an extended cold ferment, to break down gluten and phytic acid. Skipping this step is one reason people ask can sourdough bread make you sick, and the answer is yes, especially with underfermented loaves.
Temperature matters too. Always bake your bread to an internal temperature of 205°F (96°C). If it’s gummy in the center, it hasn’t finished baking. That dense texture may harbor unwanted bacteria, and it’s tough on your gut.
Also consider cleanliness. Reusing unwashed cloths or letting raw flour crust linger in your banneton can introduce spoilage organisms. Keep everything fresh and sanitized. Poor hygiene is a hidden factor behind many cases where bakers ask can sourdough bread make you sick unexpectedly.
Want guidance? Our Beginner’s Sourdough Guide covers the timeline and tools for baking safely every time.
Know Your Body & Your Bread
Even with perfect technique, some bodies react differently. If you’re still unsure, keep a log. Track flour type, fermentation length, hydration, and how you feel after eating.
Some people do better with low hydration or long ferments. Others respond poorly to whole wheat or rye. Your body knows what works, you just have to listen.
If you’re troubleshooting, our Sourdough Problem Solver can help you get clarity fast.
So, can sourdough bread make you sick? Yes, if the process is rushed or your body reacts to certain compounds. But with mindfulness and technique, sourdough can be one of the healthiest breads you’ll ever bake.

Conclusion: It’s All About Process and Awareness
So, can sourdough bread make you sick? Yes, it can. But that doesn’t mean you have to fear it. When you learn how fermentation, baking time, and storage affect the final loaf, you’re empowered to bake bread that’s not just safe, but nourishing.
I’ve had my share of mistakes. I’ve pulled underbaked loaves from the oven and tried to ignore that sinking feeling in my gut, literally. But sourdough taught me patience, observation, and joy. It’s more than a rustic crust or perfect crumb, it’s a relationship with your ingredients, your body, and your process.
If you’re feeling off, don’t give up. Try again. Test longer ferments. Adjust your flour. Log your reactions. Every great baker I know has asked, can sourdough bread make you sick? It’s a smart question, and the first step toward baking bread that truly loves you back.
FAQs About Sourdough and Sickness
Why is my sourdough making me sick?
It’s likely due to underfermentation, underbaking, or improper storage. If your bread isn’t fully fermented or baked to the right internal temp, it can contain compounds that irritate digestion. In some cases, histamines or gluten may be the trigger. So yes, sourdough can make you sick, but it’s usually preventable.
Can sourdough bread upset your stomach?
Yes, especially if you’re sensitive to histamines, gluten, or phytic acid. Short ferments and unbalanced hydration can also cause discomfort. Always bake thoroughly, ferment long, and monitor how your body responds.
Does sourdough bread have side effects?
In healthy individuals, sourdough is often easier to digest than commercial bread. But for people with histamine intolerance, IBS, or celiac disease, it can cause symptoms like bloating, headaches, or fatigue.
Who should avoid sourdough bread?
Anyone with celiac disease, severe histamine intolerance, or compromised digestion may need to avoid or limit sourdough. If you suspect issues, talk to a health professional, and test small batches at home with long ferment times.